species:   Drmel
pid:       MI0005832
parent:    dme-mir-975
paralog:   
locus:     NC_004354.4:19558753-19558843
matures:   ['UAAACACUUCCUACAUCCUGUAU', 'ACAGAUGUGGGAGUCGUUUGCA']
srr:       SRR11906543
genome:    /Users/jax/+Genomes/Animal_genomes/Drmel.GCF_000001215.4_Release_6_plus_ISO1_MT_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Drmel.SRR11906543.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Drmel.SRR11906543.cram NC_004354.4:19558753-19558843

0 out of bounds
62 alignments
62 proper strand
58 stranded perfect matches

             *************************              ************************               
UUGAAUUUUUGAUUUUAAACACUUCCUACAUCCUGUAUGUGUUUUGCAUCCGGUACAGAUGUGGGAGUCGUUUGCACUCAGAGAUUUCACA
..((((((((((...((((((((.((((((((.(((((((((...))))...)))))))))))))))).)))))...))))))))))....
---------------UAAACACUUCCUACAUCCUGUAU----------------------------------------------------- l=23 a=20 c
------------------------------------------------------ACAGAUGUGGGAGUCGUUUGCA--------------- l=22 a=9 c*
---------------UAAACACUUCCUACAUCCUGUAU----------------------------------------------------- l=23 a=20 ma
------------------------------------------------------ACAGAUGUGGGAGUCGUUUGCA--------------- l=22 a=9 ma*

--------------UUAAACACUUCCUACAUCCU--------------------------------------------------------- l=20 a=1 
--------------UUAAACACUUCCUACAUCCUG-------------------------------------------------------- l=21 a=3 
--------------UUAAACACUUCCUACAUCCUGU------------------------------------------------------- l=22 a=4 
--------------UUAAACACUUCCUACAUCCUGUA------------------------------------------------------ l=23 a=1 
---------------UAAACACUUCCUACAUCCUGU------------------------------------------------------- l=21 a=6 
---------------UAAACACUUCCUACAUCCUGUA------------------------------------------------------ l=22 a=6 
---------------UAAACACUUCCUACAUCCUGUAU----------------------------------------------------- l=23 a=20 (c,ma)
---------------UAAACACUUCCUACAUCCUGUAa----------------------------------------------------- l=23 a=3 
---------------UAAACACUUCCUACAUCCUGUAUa---------------------------------------------------- l=24 a=1 
-----------------------------------------------------UACAGAUGUGGGAGUCGUUUGCA--------------- l=23 a=2 
------------------------------------------------------ACAGAUGUGGGAGUCGUUUG----------------- l=20 a=1 
------------------------------------------------------ACAGAUGUGGGAGUCGUUUGC---------------- l=21 a=3 
------------------------------------------------------ACAGAUGUGGGAGUCGUUUGCA--------------- l=22 a=9 (c*,ma*)
-------------------------------------------------------CAGAUGUGGGAGUCGUUUGCA--------------- l=21 a=1 
-------------------------------------------------------CAGAUGUGGGAGUCGUUUGCAC-------------- l=22 a=1 

mb-01111
ax-1111011
ku-01
ss-111111111111
fn-111
